2023

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The National Library of Medicine indexer assignment dataset: A new large-scale dataset for reviewer assignment research
Alastair R. Rae | James G. Mork | Dina Demner-Fushman
2023 Volume 74 Issue 2

2021

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Overview of the ImageCLEF 2021: Multimedia Retrieval in Medical, Nature, Internet and Social Media Applications
Bogdan Ionescu | Henning Müller | Renaud Péteri | Asma Ben Abacha | Mourad Sarrouti | Dina Demner-Fushman | Sadid A. Hasan | Serge Kozlovski | Vitali Liauchuk | Yashin Dicente Cid | Vassili Kovalev | Obioma Pelka | Alba García Seco de Herrera | Janadhip Jacutprakart | Christoph M. Friedrich | Raul Berari | Andrei Tauteanu | Dimitri Fichou | Paul Brie | Mihai Dogariu | Liviu-Daniel Stefan | Mihai Gabriel Constantin | Jon Chamberlain | Antonio Campello | Adrian F. Clark | Thomas Oliver | Hassan Moustahfid | Adrian Popescu | Jerome Deshayes-Chossart
Experimental IR Meets Multilinguality, Multimodality, and Interaction - 12th International Conference of the CLEF Association, CLEF 2021, Virtual Event, September 21-24, 2021, Proceedings

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Overview of the VQA-Med Task at ImageCLEF 2021: Visual Question Answering and Generation in the Medical Domain
Asma Ben Abacha | Mourad Sarrouti | Dina Demner-Fushman | Sadid A. Hasan | Henning Müller
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to - 24th, 2021

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NLM at BioASQ Synergy 2021: Deep Learning-based Methods for Biomedical Semantic Question Answering about COVID-19
Mourad Sarrouti | Deepak Gupta | Asma Ben Abacha | Dina Demner-Fushman
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to - 24th, 2021

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A Neural Text Ranking Approach for Automatic MeSH Indexing
Alastair R. Rae | James G. Mork | Dina Demner-Fushman
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to - 24th, 2021

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The 2021 ImageCLEF Benchmark: Multimedia Retrieval in Medical, Nature, Internet and Social Media Applications
Bogdan Ionescu | Henning Müller | Renaud Péteri | Asma Ben Abacha | Dina Demner-Fushman | Sadid A. Hasan | Mourad Sarrouti | Obioma Pelka | Christoph M. Friedrich | Alba Garcia Seco de Herrera | Janadhip Jacutprakart | Vassili Kovalev | Serge Kozlovski | Vitali Liauchuk | Yashin Dicente Cid | Jon Chamberlain | Adrian F. Clark | Antonio Campello | Hassan Moustahfid | Thomas Oliver | Abigail Schulz | Paul Brie | Raul Berari | Dimitri Fichou | Andrei Tauteanu | Mihai Dogariu | Liviu-Daniel Stefan | Mihai Gabriel Constantin | Jérôme Deshayes | Adrian Popescu
Advances in Information Retrieval - 43rd European Conference on IR Research, ECIR 2021, Virtual Event, March 28 - April 1, 2021, Proceedings, Part II

2020

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TREC-COVID: constructing a pandemic information retrieval test collection
Ellen M. Voorhees | Tasmeer Alam | Steven Bedrick | Dina Demner-Fushman | William R. Hersh | Kyle Lo | Kirk Roberts | Ian Soboroff | Lucy Lu Wang
2020 Volume 54 Issue 1

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Overview of the TREC 2020 Precision Medicine Track
Kirk Roberts | Dina Demner-Fushman | Ellen M. Voorhees | Steven Bedrick | William R. Hersh
Proceedings of the Twenty-Ninth Text REtrieval Conference, TREC 2020, Virtual Event [Gaithersburg, Maryland, USA], November 16-20, 2020

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NLM at TREC 2020 Health Misinformation and Deep Learning Tracks
Yassine Mrabet | Mourad Sarrouti | Asma Ben Abacha | Soumya Gayen | Travis R. Goodwin | Alastair R. Rae | Willie Rogers | Dina Demner-Fushman
Proceedings of the Twenty-Ninth Text REtrieval Conference, TREC 2020, Virtual Event [Gaithersburg, Maryland, USA], November 16-20, 2020

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Overview of the ImageCLEF 2020: Multimedia Retrieval in Medical, Lifelogging, Nature, and Internet Applications
Bogdan Ionescu | Henning Müller | Renaud Péteri | Asma Ben Abacha | Vivek V. Datla | Sadid A. Hasan | Dina Demner-Fushman | Serge Kozlovski | Vitali Liauchuk | Yashin Dicente Cid | Vassili Kovalev | Obioma Pelka | Christoph M. Friedrich | Alba García Seco de Herrera | Van-Tu Ninh | Tu-Khiem Le | Liting Zhou | Luca Piras | Michael Riegler | Pål Halvorsen | Minh-Triet Tran | Mathias Lux | Cathal Gurrin | Duc-Tien Dang-Nguyen | Jon Chamberlain | Adrian F. Clark | Antonio Campello | Dimitri Fichou | Raul Berari | Paul Brie | Mihai Dogariu | Liviu-Daniel Stefan | Mihai Gabriel Constantin
Experimental IR Meets Multilinguality, Multimodality, and Interaction - 11th International Conference of the CLEF Association, CLEF 2020, Thessaloniki, Greece, September 22-25, 2020, Proceedings

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Overview of the VQA-Med Task at ImageCLEF 2020: Visual Question Answering and Generation in the Medical Domain
Asma Ben Abacha | Vivek V. Datla | Sadid A. Hasan | Dina Demner-Fushman | Henning Müller
Working Notes of CLEF 2020 - Conference and Labs of the Evaluation Forum, Thessaloniki, Greece, September 22-25, 2020

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ImageCLEF 2020: Multimedia Retrieval in Lifelogging, Medical, Nature, and Internet Applications
Bogdan Ionescu | Henning Müller | Renaud Péteri | Duc-Tien Dang-Nguyen | Liting Zhou | Luca Piras | Michael Riegler | Pål Halvorsen | Minh-Triet Tran | Mathias Lux | Cathal Gurrin | Jon Chamberlain | Adrian F. Clark | Antonio Campello | Alba Garcia Seco de Herrera | Asma Ben Abacha | Vivek V. Datla | Sadid A. Hasan | Joey Liu | Dina Demner-Fushman | Obioma Pelka | Christoph M. Friedrich | Yashin Dicente Cid | Serge Kozlovski | Vitali Liauchuk | Vassili Kovalev | Raul Berari | Paul Brie | Dimitri Fichou | Mihai Dogariu | Liviu-Daniel Stefan | Mihai Gabriel Constantin
Advances in Information Retrieval - 42nd European Conference on IR Research, ECIR 2020, Lisbon, Portugal, April 14-17, 2020, Proceedings, Part II

2019

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Overview of the TREC 2019 Precision Medicine Track
Kirk Roberts | Dina Demner-Fushman | Ellen M. Voorhees | William R. Hersh | Steven Bedrick | Alexander J. Lazar | Shubham Pant | Funda Meric-Bernstam
Proceedings of the Twenty-Eighth Text REtrieval Conference, TREC 2019, Gaithersburg, Maryland, USA, November 13-15, 2019

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VQA-Med: Overview of the Medical Visual Question Answering Task at ImageCLEF 2019
Asma Ben Abacha | Sadid A. Hasan | Vivek V. Datla | Joey Liu | Dina Demner-Fushman | Henning Müller
Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019

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ImageCLEF 2019: Multimedia Retrieval in Medicine, Lifelogging, Security and Nature
Bogdan Ionescu | Henning Müller | Renaud Péteri | Yashin Dicente Cid | Vitali Liauchuk | Vassili Kovalev | Dzmitri Klimuk | Aleh Tarasau | Asma Ben Abacha | Sadid A. Hasan | Vivek V. Datla | Joey Liu | Dina Demner-Fushman | Duc-Tien Dang-Nguyen | Luca Piras | Michael Riegler | Minh-Triet Tran | Mathias Lux | Cathal Gurrin | Obioma Pelka | Christoph M. Friedrich | Alba Garcia Seco de Herrera | Narciso García | Ergina Kavallieratou | Carlos Roberto del-Blanco | Carlos Cuevas | Nikos Vasilopoulos | Konstantinos Karampidis | Jon Chamberlain | Adrian F. Clark | Antonio Campello
Experimental IR Meets Multilinguality, Multimodality, and Interaction - 10th International Conference of the CLEF Association, CLEF 2019, Lugano, Switzerland, September 9-12, 2019, Proceedings

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ImageCLEF 2019: Multimedia Retrieval in Lifelogging, Medical, Nature, and Security Applications
Bogdan Ionescu | Henning Müller | Renaud Péteri | Duc-Tien Dang-Nguyen | Luca Piras | Michael Riegler | Minh-Triet Tran | Mathias Lux | Cathal Gurrin | Yashin Dicente Cid | Vitali Liauchuk | Vassili Kovalev | Asma Ben Abacha | Sadid A. Hasan | Vivek V. Datla | Joey Liu | Dina Demner-Fushman | Obioma Pelka | Christoph M. Friedrich | Jon Chamberlain | Adrian F. Clark | Alba Garcia Seco de Herrera | Narciso García | Ergina Kavallieratou | Carlos Roberto del-Blanco | Carlos Cuevas | Nikos Vasilopoulos | Konstantinos Karampidis
Advances in Information Retrieval - 41st European Conference on IR Research, ECIR 2019, Cologne, Germany, April 14-18, 2019, Proceedings, Part II

2018

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Overview of the TREC 2018 Precision Medicine Track
Kirk Roberts | Dina Demner-Fushman | Ellen M. Voorhees | William R. Hersh | Steven Bedrick | Alexander J. Lazar
Proceedings of the Twenty-Seventh Text REtrieval Conference, TREC 2018, Gaithersburg, Maryland, USA, November 14-16, 2018

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NLM at ImageCLEF 2018 Visual Question Answering in the Medical Domain
Asma Ben Abacha | Soumya Gayen | Jason J. Lau | Sivaramakrishnan Rajaraman | Dina Demner-Fushman
Working Notes of CLEF 2018 - Conference and Labs of the Evaluation Forum, Avignon, France, September 10-14, 2018

2017

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A protocol-driven approach to automatically finding authoritative answers to consumer health questions in online resources
Ariel Deardorff | Kate Masterton | Kirk Roberts | Halil Kilicoglu | Dina Demner-Fushman
2017 Volume 68 Issue 7

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Overview of the TREC 2017 Precision Medicine Track
Kirk Roberts | Dina Demner-Fushman | Ellen M. Voorhees | William R. Hersh | Steven Bedrick | Alexander J. Lazar | Shubham Pant
Proceedings of The Twenty-Sixth Text REtrieval Conference, TREC 2017, Gaithersburg, Maryland, USA, November 15-17, 2017

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Overview of the Medical Question Answering Task at TREC 2017 LiveQA
Asma Ben Abacha | Eugene Agichtein | Yuval Pinter | Dina Demner-Fushman
Proceedings of The Twenty-Sixth Text REtrieval Conference, TREC 2017, Gaithersburg, Maryland, USA, November 15-17, 2017

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NLM at ImageCLEF 2017 Caption Task
Asma Ben Abacha | Alba Garcia Seco de Herrera | Soumya Gayen | Dina Demner-Fushman | Sameer K. Antani
Working Notes of CLEF 2017 - Conference and Labs of the Evaluation Forum, Dublin, Ireland, September 11-14, 2017

2016

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State-of-the-art in biomedical literature retrieval for clinical cases: a survey of the TREC 2014 CDS track
Kirk Roberts | Matthew S. Simpson | Dina Demner-Fushman | Ellen M. Voorhees | William R. Hersh
2016 Volume 19 Issue 1-2

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Overview of the TREC 2016 Clinical Decision Support Track
Kirk Roberts | Dina Demner-Fushman | Ellen M. Voorhees | William R. Hersh
Proceedings of The Twenty-Fifth Text REtrieval Conference, TREC 2016, Gaithersburg, Maryland, USA, November 15-18, 2016

2015

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Annotation of Chest Radiology Reports for Indexing and Retrieval
Dina Demner-Fushman | Sonya E. Shooshan | Laritza Rodriguez | Sameer K. Antani | George R. Thoma
Multimodal Retrieval in the Medical Domain - First International Workshop, MRMD 2015, Vienna, Austria, March 29, 2015, Revised Selected Papers

2014

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Multimodal biomedical image indexing and retrieval using descriptive text and global feature mapping
Matthew S. Simpson | Dina Demner-Fushman | Sameer K. Antani | George R. Thoma
2014 Volume 17 Issue 3

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Interactive cross and multimodal biomedical image retrieval based on automatic region-of-interest (ROI) identification and classification
Md. Mahmudur Rahman | Daekeun You | Matthew S. Simpson | Sameer K. Antani | Dina Demner-Fushman | George R. Thoma
2014 Volume 3 Issue 3

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Recent Enhancements to the NLM Medical Text Indexer
James G. Mork | Dina Demner-Fushman | Susan Schmidt | Alan R. Aronson
Working Notes for CLEF 2014 Conference, Sheffield, UK, September 15-18, 2014

2013

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Multimodal biomedical image retrieval using hierarchical classification and modality fusion
Md. Mahmudur Rahman | Daekeun You | Matthew S. Simpson | Sameer K. Antani | Dina Demner-Fushman | George R. Thoma
2013 Volume 2 Issue 3

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Image retrieval from scientific publications: Text and image content processing to separate multipanel figures
Emilia Apostolova | Daekeun You | Zhiyun Xue | Sameer K. Antani | Dina Demner-Fushman | George R. Thoma
2013 Volume 64 Issue 5

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Overview of the ImageCLEF 2013 Medical Tasks
Alba Garcia Seco de Herrera | Jayashree Kalpathy-Cramer | Dina Demner-Fushman | Sameer K. Antani | Henning Müller
Working Notes for CLEF 2013 Conference , Valencia, Spain, September 23-26, 2013

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ITI's Participation in the 2013 Medical Track of ImageCLEF
Matthew S. Simpson | Daekeun You | Md. Mahmudur Rahman | Dina Demner-Fushman | Sameer K. Antani | George R. Thoma
Working Notes for CLEF 2013 Conference , Valencia, Spain, September 23-26, 2013

2012

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Overview of the ImageCLEF 2012 Medical Image Retrieval and Classification Tasks
Henning Müller | Alba Garcia Seco de Herrera | Jayashree Kalpathy-Cramer | Dina Demner-Fushman | Sameer K. Antani | Ivan Eggel
CLEF 2012 Evaluation Labs and Workshop, Online Working Notes, Rome, Italy, September 17-20, 2012

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ITI's Participation in the ImageCLEF 2012 Medical Retrieval and Classification Tasks
Matthew S. Simpson | Daekeun You | Md. Mahmudur Rahman | Dina Demner-Fushman | Sameer K. Antani | George R. Thoma
CLEF 2012 Evaluation Labs and Workshop, Online Working Notes, Rome, Italy, September 17-20, 2012

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NLM at TREC 2012 Medical Records Track
Dina Demner-Fushman | Swapna Abhyankar | Antonio Jimeno-Yepes | Russell F. Loane | François-Michel Lang | James G. Mork | Nicolas Ide | Alan R. Aronson
Proceedings of The Twenty-First Text REtrieval Conference, TREC 2012, Gaithersburg, Maryland, USA, November 6-9, 2012

2011

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Text and Content-based Approaches to Image Modality Classification and Retrieval for the ImageCLEF 2011 Medical Retrieval Track
Matthew S. Simpson | Md. Mahmudur Rahman | Srinivas Phadnis | Emilia Apostolova | Dina Demner-Fushman | Sameer K. Antani | George R. Thoma
CLEF 2011 Labs and Workshop, Notebook Papers, 19-22 September 2011, Amsterdam, The Netherlands

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A Knowledge-Based Approach to Medical Records Retrieval
Dina Demner-Fushman | Swapna Abhyankar | Antonio Jimeno-Yepes | Russell F. Loane | Bastien Rance | François-Michel Lang | Nicholas C. Ide | Emilia Apostolova | Alan R. Aronson
Proceedings of The Twentieth Text REtrieval Conference, TREC 2011, Gaithersburg, Maryland, USA, November 15-18, 2011

2010

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Text- and Content-based Approaches to Image Modality Detection and Retrieval for the ImageCLEF 2010 Medical Retrieval Track
Matthew S. Simpson | Md. Mahmudur Rahman | Sachin Singhal | Dina Demner-Fushman | Sameer K. Antani | George R. Thoma
CLEF 2010 LABs and Workshops, Notebook Papers, 22-23 September 2010, Padua, Italy

2009

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Text- and Content-based Approaches to Image Retrieval for the ImageCLEF 2009 Medical Retrieval Track
Matthew S. Simpson | Md. Mahmudur Rahman | Dina Demner-Fushman | Sameer K. Antani | George R. Thoma
Working Notes for CLEF 2009 Workshop co-located with the 13th European Conference on Digital Libraries (ECDL 2009) , Corfù, Greece, September 30 - October 2, 2009

2007

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Combining Resources to Find Answers to Biomedical Questions
Dina Demner-Fushman | Susanne M. Humphrey | Nicholas C. Ide | Russell F. Loane | James G. Mork | Patrick Ruch | Miguel E. Ruiz | Lawrence H. Smith | W. John Wilbur | Alan R. Aronson
Proceedings of The Sixteenth Text REtrieval Conference, TREC 2007, Gaithersburg, Maryland, USA, November 5-9, 2007

2006

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Methods for automatically evaluating answers to complex questions
Jimmy Lin | Dina Demner-Fushman
2006 Volume 9 Issue 5

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Word sense disambiguation by selecting the best semantic type based on Journal Descriptor Indexing: Preliminary experiment
Susanne M. Humphrey | Willie J. Rogers | Halil Kilicoglu | Dina Demner-Fushman | Thomas C. Rindflesch
2006 Volume 57 Issue 1

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Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort
Dina Demner-Fushman | Susanne M. Humphrey | Nicholas C. Ide | Russell F. Loane | Patrick Ruch | Miguel E. Ruiz | Lawrence H. Smith | Lorraine K. Tanabe | W. John Wilbur | Alan R. Aronson
Proceedings of the Fifteenth Text REtrieval Conference, TREC 2006, Gaithersburg, Maryland, USA, November 14-17, 2006

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Exploring the limits of single-iteration clarification dialogs
Jimmy Lin | Philip Wu | Dina Demner-Fushman | Eileen G. Abels
SIGIR 2006: Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, Seattle, Washington, USA, August 6-11, 2006

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The role of knowledge in conceptual retrieval: a study in the domain of clinical medicine
Jimmy Lin | Dina Demner-Fushman
SIGIR 2006: Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, Seattle, Washington, USA, August 6-11, 2006

2005

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Fusion of Knowledge-Intensive and Statistical Approaches for Retrieving and Annotating Textual Genomics Documents
Alan R. Aronson | Dina Demner-Fushman | Susanne M. Humphrey | Jimmy Lin | Patrick Ruch | Miguel E. Ruiz | Lawrence H. Smith | Lorraine K. Tanabe | W. John Wilbur | Hongfang Liu
Proceedings of the Fourteenth Text REtrieval Conference, TREC 2005, Gaithersburg, Maryland, USA, November 15-18, 2005

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A Menagerie of Tracks at Maryland: HARD, Enterprise, QA, and Genomics, Oh My!
Jimmy Lin | Eileen G. Abels | Dina Demner-Fushman | Douglas W. Oard | Philip Wu | Yejun Wu
Proceedings of the Fourteenth Text REtrieval Conference, TREC 2005, Gaithersburg, Maryland, USA, November 15-18, 2005

2004

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Knowledge-Intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations
Alan R. Aronson | Susanne M. Humphrey | Nicholas C. Ide | Won Kim | Russell F. Loane | James G. Mork | Lawrence H. Smith | Lorraine K. Tanabe | W. John Wilbur | Natalie Xie | Dina Demner-Fushman | Hongfang Liu
Proceedings of the Thirteenth Text REtrieval Conference, TREC 2004, Gaithersburg, Maryland, USA, November 16-19, 2004

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Improving Passage Retrieval Using Interactive Elicition and Statistical Modeling
Daqing He | Dina Demner-Fushman | Douglas W. Oard | Damianos G. Karakos | Sanjeev Khudanpur
Proceedings of the Thirteenth Text REtrieval Conference, TREC 2004, Gaithersburg, Maryland, USA, November 16-19, 2004

2003

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HARD Experiment at Maryland: From Need Negotiation to Automated HARD Process
Daqing He | Dina Demner-Fushman
Proceedings of The Twelfth Text REtrieval Conference, TREC 2003, Gaithersburg, Maryland, USA, November 18-21, 2003

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Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics
Mehmet Kayaalp | Alan R. Aronson | Susanne M. Humphrey | Nicholas C. Ide | Lorraine K. Tanabe | Lawrence H. Smith | Dina Demner-Fushman | Russell F. Loane | James G. Mork | Olivier Bodenreider
Proceedings of The Twelfth Text REtrieval Conference, TREC 2003, Gaithersburg, Maryland, USA, November 18-21, 2003