2022

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Extended Overview of ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents
Yuan Li | Biaoyan Fang | Jiayuan He | Hiyori Yoshikawa | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Zubair Afzal | Zenan Zhai | Kojiro Machi | Masaharu Yoshioka | Youngrok Jang | Hosung Song | Junho Lee | Gyeonghun Kim | Yireun Kim | Stanley Jungkyu Choi | Honglak Lee | Kyunghoon Bae | Darshini Mahendran | Christina Tang | Bridget T. McInnes | Timothy Baldwin | Karin Verspoor
Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to - 8th, 2022

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Overview of ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents
Yuan Li | Biaoyan Fang | Jiayuan He | Hiyori Yoshikawa | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Zubair Afzal | Zenan Zhai | Timothy Baldwin | Karin Verspoor
Experimental IR Meets Multilinguality, Multimodality, and Interaction - 13th International Conference of the CLEF Association, CLEF 2022, Bologna, Italy, September 5-8, 2022, Proceedings

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Why Bother Enabling Biomedical Literature Analysis with Semantics?
Karin Verspoor
Companion of The Web Conference 2022, Virtual Event / Lyon, France, April 25 - 29, 2022

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The ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents
Yuan Li | Biaoyan Fang | Jiayuan He | Hiyori Yoshikawa | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Zenan Zhai | Zubair Afzal | Trevor Cohn | Timothy Baldwin | Karin Verspoor
Advances in Information Retrieval - 44th European Conference on IR Research, ECIR 2022, Stavanger, Norway, April 10-14, 2022, Proceedings, Part II

2021

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Overview of ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents
Yuan Li | Biaoyan Fang | Jiayuan He | Hiyori Yoshikawa | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Zubair Afzal | Zenan Zhai | Timothy Baldwin | Karin Verspoor
Experimental IR Meets Multilinguality, Multimodality, and Interaction - 12th International Conference of the CLEF Association, CLEF 2021, Virtual Event, September 21-24, 2021, Proceedings

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Extended Overview of ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents
Yuan Li | Biaoyan Fang | Jiayuan He | Hiyori Yoshikawa | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Zubair Afzal | Zenan Zhai | Timothy Baldwin | Karin Verspoor
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to - 24th, 2021

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ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents
Jiayuan He | Biaoyan Fang | Hiyori Yoshikawa | Yuan Li | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Zubair Afzal | Zenan Zhai | Lawrence Cavedon | Trevor Cohn | Timothy Baldwin | Karin Verspoor
Advances in Information Retrieval - 43rd European Conference on IR Research, ECIR 2021, Virtual Event, March 28 - April 1, 2021, Proceedings, Part II

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Brief Description of COVID-SEE: The Scientific Evidence Explorer for COVID-19 Related Research
Karin Verspoor | Simon Suster | Yulia Otmakhova | Shevon Mendis | Zenan Zhai | Biaoyan Fang | Jey Han Lau | Timothy Baldwin | Antonio Jimeno-Yepes | David Martínez
Advances in Information Retrieval - 43rd European Conference on IR Research, ECIR 2021, Virtual Event, March 28 - April 1, 2021, Proceedings, Part II

2020

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Overview of ChEMU 2020: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents
Jiayuan He | Dat Quoc Nguyen | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Ralph Hoessel | Zubair Afzal | Zenan Zhai | Biaoyan Fang | Hiyori Yoshikawa | Ameer Albahem | Lawrence Cavedon | Trevor Cohn | Timothy Baldwin | Karin Verspoor
Experimental IR Meets Multilinguality, Multimodality, and Interaction - 11th International Conference of the CLEF Association, CLEF 2020, Thessaloniki, Greece, September 22-25, 2020, Proceedings

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An Extended Overview of the CLEF 2020 ChEMU Lab: Information Extraction of Chemical Reactions from Patents
Jiayuan He | Dat Quoc Nguyen | Saber A. Akhondi | Christian Druckenbrodt | Camilo Thorne | Ralph Hoessel | Zubair Afzal | Zenan Zhai | Biaoyan Fang | Hiyori Yoshikawa | Ameer Albahem | Jingqi Wang | Yuankai Ren | Zhi Zhang | Yaoyun Zhang | Mai Hoang Dao | Pedro Ruas | Andre Lamurias | Francisco M. Couto | Jenny Copara | Nona Naderi | Julien Knafou | Patrick Ruch | Douglas Teodoro | Daniel M. Lowe | John Mayfield | Abdullatif Köksal | Hilal Dönmez | Elif Özkirimli | Arzucan Özgür | Darshini Mahendran | Gabrielle Gurdin | Nastassja Lewinski | Christina Tang | Bridget T. McInnes | C. S. Malarkodi | Pattabhi Rk Rao | Sobha Lalitha Devi | Lawrence Cavedon | Trevor Cohn | Timothy Baldwin | Karin Verspoor
Working Notes of CLEF 2020 - Conference and Labs of the Evaluation Forum, Thessaloniki, Greece, September 22-25, 2020

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ChEMU: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents
Dat Quoc Nguyen | Zenan Zhai | Hiyori Yoshikawa | Biaoyan Fang | Christian Druckenbrodt | Camilo Thorne | Ralph Hoessel | Saber A. Akhondi | Trevor Cohn | Timothy Baldwin | Karin Verspoor
Advances in Information Retrieval - 42nd European Conference on IR Research, ECIR 2020, Lisbon, Portugal, April 14-17, 2020, Proceedings, Part II

2019

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End-to-End Neural Relation Extraction Using Deep Biaffine Attention
Dat Quoc Nguyen | Karin Verspoor
Advances in Information Retrieval - 41st European Conference on IR Research, ECIR 2019, Cologne, Germany, April 14-18, 2019, Proceedings, Part I

2018

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The Dagstuhl Perspectives Workshop on Performance Modeling and Prediction
Nicola Ferro | Norbert Fuhr | Gregory Grefenstette | Joseph A. Konstan | Pablo Castells | Elizabeth M. Daly | Thierry Declerck | Michael D. Ekstrand | Werner Geyer | Julio Gonzalo | Tsvi Kuflik | Krister Lindén | Bernardo Magnini | Jian-Yun Nie | Raffaele Perego | Bracha Shapira | Ian Soboroff | Nava Tintarev | Karin Verspoor | Martijn C. Willemsen | Justin Zobel
2018 Volume 52 Issue 1

2017

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Learning Biological Sequence Types Using the Literature
Mohamed Reda Bouadjenek | Karin Verspoor | Justin Zobel
Proceedings of the 2017 ACM on Conference on Information and Knowledge Management, CIKM 2017, Singapore, November 06 - 10, 2017

2015

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Evaluation of a Machine Learning Duplicate Detection Method for Bioinformatics Databases
Qingyu Chen | Justin Zobel | Karin Verspoor
Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics, DTMBIO 2015, Melbourne, Australia, October 23, 2015

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Extraction of Fine-grained Semantic Relations for the Human Variome
Karin Verspoor | Go Eun Heo | Keun Young Kang | Min Song
Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics, DTMBIO 2015, Melbourne, Australia, October 23, 2015

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Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics, DTMBIO 2015, Melbourne, Australia, October 23, 2015

Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics, DTMBIO 2015, Melbourne, Australia, October 23, 2015

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DTMBIO 2015: International Workshop on Data and Text Mining in Biomedical Informatics
Min Song | Doheon Lee | Karin Verspoor
Proceedings of the 24th ACM International Conference on Information and Knowledge Management, CIKM 2015, Melbourne, VIC, Australia, October 19 - 23, 2015

2014

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Evaluation of Coreference Resolution for Biomedical Text
Miji Choi | Karin Verspoor | Justin Zobel
Proceedings of the Medical Information Retrieval Workshop at SIGIR co-located with the 37th annual international ACM SIGIR conference (ACM SIGIR 2014), Gold Coast, Australia, July 11, 2014

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Designing for Health Exploratory Seeking Behaviour
Patrick Cheong-Iao Pang | Karin Verspoor | Shanton Chang | Jon M. Pearce
Proceedings of the Medical Information Retrieval Workshop at SIGIR co-located with the 37th annual international ACM SIGIR conference (ACM SIGIR 2014), Gold Coast, Australia, July 11, 2014

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Practice-based Evidence in Medicine: Where Information Retrieval Meets Data Mining
Karin Verspoor
Proceedings of the Medical Information Retrieval Workshop at SIGIR co-located with the 37th annual international ACM SIGIR conference (ACM SIGIR 2014), Gold Coast, Australia, July 11, 2014

2012

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Simple Similarity-based Question Answering Strategies for Biomedical Text
David Martínez | Andrew MacKinlay | Diego Mollá Aliod | Lawrence Cavedon | Karin Verspoor
CLEF 2012 Evaluation Labs and Workshop, Online Working Notes, Rome, Italy, September 17-20, 2012