Karin Verspoor

2022

doi dblp

Overview of ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents.

Yuan Li|Biaoyan Fang|Jiayuan He|Hiyori Yoshikawa|Saber A. Akhondi|Christian Druckenbrodt|Camilo Thorne|Zubair Afzal|Zenan Zhai|Timothy Baldwin|Karin Verspoor

Experimental IR Meets Multilinguality, Multimodality, and Interaction - 13th International Conference of the CLEF Association, CLEF 2022, Bologna, Italy, September 5-8, 2022, Proceedings

doi dblp

The ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents.

Yuan Li|Biaoyan Fang|Jiayuan He|Hiyori Yoshikawa|Saber A. Akhondi|Christian Druckenbrodt|Camilo Thorne|Zenan Zhai|Zubair Afzal|Trevor Cohn|Timothy Baldwin|Karin Verspoor

Advances in Information Retrieval - 44th European Conference on IR Research, ECIR 2022, Stavanger, Norway, April 10-14, 2022, Proceedings, Part II

doi dblp

Why Bother Enabling Biomedical Literature Analysis with Semantics?

Karin Verspoor

Companion of The Web Conference 2022, Virtual Event / Lyon, France, April 25 - 29, 2022

2021

doi dblp

Overview of ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents.

Yuan Li|Biaoyan Fang|Jiayuan He|Hiyori Yoshikawa|Saber A. Akhondi|Christian Druckenbrodt|Camilo Thorne|Zubair Afzal|Zenan Zhai|Timothy Baldwin|Karin Verspoor

Experimental IR Meets Multilinguality, Multimodality, and Interaction - 12th International Conference of the CLEF Association, CLEF 2021, Virtual Event, September 21-24, 2021, Proceedings

dblp

Extended Overview of ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents.

Yuan Li|Biaoyan Fang|Jiayuan He|Hiyori Yoshikawa|Saber A. Akhondi|Christian Druckenbrodt|Camilo Thorne|Zubair Afzal|Zenan Zhai|Timothy Baldwin|Karin Verspoor

Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to - 24th, 2021.

doi dblp

ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents.

Jiayuan He|Biaoyan Fang|Hiyori Yoshikawa|Yuan Li|Saber A. Akhondi|Christian Druckenbrodt|Camilo Thorne|Zubair Afzal|Zenan Zhai|Lawrence Cavedon|Trevor Cohn|Timothy Baldwin|Karin Verspoor

Advances in Information Retrieval - 43rd European Conference on IR Research, ECIR 2021, Virtual Event, March 28 - April 1, 2021, Proceedings, Part II

doi dblp

Brief Description of COVID-SEE: The Scientific Evidence Explorer for COVID-19 Related Research.

Karin Verspoor|Simon Suster|Yulia Otmakhova|Shevon Mendis|Zenan Zhai|Biaoyan Fang|Jey Han Lau|Timothy Baldwin|Antonio Jimeno-Yepes|David Martínez

Advances in Information Retrieval - 43rd European Conference on IR Research, ECIR 2021, Virtual Event, March 28 - April 1, 2021, Proceedings, Part II

dblp

ITTC @ TREC 2021 Clinical Trials Track.

Hung-Thinh Truong|Yulia Otmakhova|Timothy Baldwin|Jey Han Lau|Trevor Cohn|Karin Verspoor|Rahmad Mahendra|Lawrence Cavedon|Damiano Spina

Proceedings of the Thirtieth Text REtrieval Conference, TREC 2021, online, November 15-19, 2021

2020

doi dblp

Overview of ChEMU 2020: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents.

Jiayuan He|Dat Quoc Nguyen|Saber A. Akhondi|Christian Druckenbrodt|Camilo Thorne|Ralph Hoessel|Zubair Afzal|Zenan Zhai|Biaoyan Fang|Hiyori Yoshikawa|Ameer Albahem|Lawrence Cavedon|Trevor Cohn|Timothy Baldwin|Karin Verspoor

Experimental IR Meets Multilinguality, Multimodality, and Interaction - 11th International Conference of the CLEF Association, CLEF 2020, Thessaloniki, Greece, September 22-25, 2020, Proceedings

dblp

An Extended Overview of the CLEF 2020 ChEMU Lab: Information Extraction of Chemical Reactions from Patents.

Jiayuan He|Dat Quoc Nguyen|Saber A. Akhondi|Christian Druckenbrodt|Camilo Thorne|Ralph Hoessel|Zubair Afzal|Zenan Zhai|Biaoyan Fang|Hiyori Yoshikawa|Ameer Albahem|Jingqi Wang|Yuankai Ren|Zhi Zhang|Yaoyun Zhang|Mai Hoang Dao|Pedro Ruas|Andre Lamurias|Francisco M. Couto|Jenny Copara|Nona Naderi|Julien Knafou|Patrick Ruch|Douglas Teodoro|Daniel M. Lowe|John Mayfield|Abdullatif Köksal|Hilal Dönmez|Elif Özkirimli|Arzucan Özgür|Darshini Mahendran|Gabrielle Gurdin|Nastassja Lewinski|Christina Tang|Bridget T. McInnes|C. S. Malarkodi|Pattabhi R. K. Rao|Sobha Lalitha Devi|Lawrence Cavedon|Trevor Cohn|Timothy Baldwin|Karin Verspoor

Working Notes of CLEF 2020 - Conference and Labs of the Evaluation Forum, Thessaloniki, Greece, September 22-25, 2020.

doi dblp

ChEMU: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents.

Dat Quoc Nguyen|Zenan Zhai|Hiyori Yoshikawa|Biaoyan Fang|Christian Druckenbrodt|Camilo Thorne|Ralph Hoessel|Saber A. Akhondi|Trevor Cohn|Timothy Baldwin|Karin Verspoor

Advances in Information Retrieval - 42nd European Conference on IR Research, ECIR 2020, Lisbon, Portugal, April 14-17, 2020, Proceedings, Part II

2019

doi dblp

End-to-End Neural Relation Extraction Using Deep Biaffine Attention.

Dat Quoc Nguyen|Karin Verspoor

Advances in Information Retrieval - 41st European Conference on IR Research, ECIR 2019, Cologne, Germany, April 14-18, 2019, Proceedings, Part I

2018

doi dblp

Web Forum Retrieval and Text Analytics: A Survey.

Doris Hoogeveen|Li Wang|Timothy Baldwin|Karin M. Verspoor

Foundations and Trends in Information Retrieval 2018 Volume 12 Issue 1

2017

doi dblp

Learning Biological Sequence Types Using the Literature.

Mohamed Reda Bouadjenek|Karin Verspoor|Justin Zobel

Proceedings of the 2017 ACM on Conference on Information and Knowledge Management, CIKM 2017, Singapore, November 06 - 10, 2017

2015

doi dblp

Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics, DTMBIO 2015, Melbourne, Australia, October 23, 2015

Doheon Lee|Shengjie Sun|Doheon Lee|Shengjie Sun|Dehong Gao|Min Song|Dehong Gao|Min Song|Duanxiao Song|Karin Verspoor|Duanxiao Song|Karin Verspoor

International Workshop on Data and Text Mining in Bioinformatics 2015

doi dblp

CQADupStack: A Benchmark Data Set for Community Question-Answering Research.

Doris Hoogeveen|Karin M. Verspoor|Timothy Baldwin

Proceedings of the 20th Australasian Document Computing Symposium, ADCS 2015, Parramatta, NSW, Australia, December 8-9, 2015

doi dblp

DTMBIO 2015: International Workshop on Data and Text Mining in Biomedical Informatics.

Min Song|Doheon Lee|Karin Verspoor

Proceedings of the 24th ACM International Conference on Information and Knowledge Management, CIKM 2015, Melbourne, VIC, Australia, October 19 - 23, 2015

doi dblp

Evaluation of a Machine Learning Duplicate Detection Method for Bioinformatics Databases.

Christoph Trattner|Qingyu Chen|Justin Zobel|Tobias Ley|Christoph Trattner|Qingyu Chen|Karin Verspoor|Justin Zobel|Tobias Ley

Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics, DTMBIO 2015, Melbourne, Australia, October 23, 2015

doi dblp

Extraction of Fine-grained Semantic Relations for the Human Variome.

Karin Verspoor|Min Gao|Junliang Yu|Go Eun Heo|Min Gao|Karin Verspoor|Lei Guo|Keun Young Kang|Junliang Yu|Go Eun Heo|Lei Guo|Min Song|Keun Young Kang

Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics, DTMBIO 2015, Melbourne, Australia, October 23, 2015

2012

doi dblp

Extracting structured information from free-text medication prescriptions using dependencies.

Andrew D. MacKinlay|Jie Gao|Karin M. Verspoor|Andrew D. MacKinlay|Jie Gao

Proceedings of the ACM sixth international workshop on Data and text mining in biomedical informatics, DTMBIO@CIKM 2012, Maui, Hawaii, USA, October 29, 2012

dblp

Simple Similarity-based Question Answering Strategies for Biomedical Text.

David Martínez|Andrew MacKinlay|Diego Mollá Aliod|Lawrence Cavedon|Karin Verspoor

CLEF 2012 Evaluation Labs and Workshop, Online Working Notes, Rome, Italy, September 17-20, 2012